Example files for Microbiome Taxonomic Profile pipeline

The below are the example files for you to test drive Microbiome Taxonomic Profile (MTP) pipeline of the EzBioCloud cloud.

• Illumina MiSeq paired-end data of a healthy male fecal sample
  • Download the below paired-end files (both):
    • miseq-example1_R1_001.fastq.gz
    • miseq-example1_R2_001.fastq.gz
  • Amplification primers: 341F = CCTACGGGNGGCWGCAG  |  805R = GACTACHVGGGTATCTAATCC
• Pacific Biosciences full-length data of a healthy male fecal sample
  • Download from the below file:
    • pacbio-example1.fastq.gz
  • Amplification primers: 27F = AGRGTTTGATYMTGGCTCAG  |  1492R = GGYTACCTTGTTACGACTT
• ATCC^(R) Microbiome Standards – 20 Strain Even Mix Whole Cell Material (MSA-2002™)
  •  Please try our tutorial for ATCC Microbiome Standards [Learn more].
  • Download the below paired-end files (both):
    • ATCC-Example1_1.fastq.gz
    • ATCC-Example1_2.fastq.gz
  • Amplification primers: 341F = CCTACGGGNGGCWGCAG  |  805R = GACTACHVGGGTATCTAATCC

The EZBioCloud team / Last edited on May 22, 2018