In this class, we will try to identify genomic islands (GI; DNA containing multiple genes that are often transferred between bacterial strains) and track down when and how these were transferred.
Before working on the project, students should take a tutorial class (available here) to familiarize themselves about bioinformatics of comparative genomics and how to use the EzBioCloud cloud platform.
We will use the same data set as “Vibrio cholerae tutorial set”. Please provide the answers to the following questions:
We will assume that dendrogram based on ANI (average nucleotide identity) reflects the real phylogeny.
서울대 천종식 교수 연구실 인턴쉽
다음은 서울대학교 생명과학부 천종식 교수 연구실의 학부생 인턴을 위한 정보입니다. 참고할 온라인 강의 Prokaryotic Taxonomy and Microbiome Machine Learning, Data Science and Deep Learning with