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EzBioCloud Resources

Everything You Need For Microbial Bioinformatics

Learn how to perform bioinformatics, taxonomy, typing and microbiome analysis on bacterial genomics. Also, learn the scientific background of some of the most widely used tools.

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Microbiome | MetagenomicsIsolate GenomicsIsolate IdentificationTrueBacEzBioCloud

[UBCG] Gene set

This document describes the gene set included the current version of UBCG phylogenomics pipeline [Learn more]. Gene COG category COG ID HMM profile Function alaS

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[OAU] Mac OSX

Step-by-step guide for Apple Mac OSX users First, download necessary files OAU.jar file from here. USEARCH 32bit version for OSX from here. Example file from

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Gene frequency plot in pan-genome

All potential orthologous protein-coding  genes (=CDSs) are clustered into non-redundant gene sets after pan-genome calculation to generate “Pan-genome Orthologous Groups (POGs)”. Obviously, a core part

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[OAU] Manual

Contents About Installation Options Single ANI calculation example Multiple ANI calculation example Contact About OAU is a command line tool for calculating OrthoANI values using

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[EzEditor2] Tutorial

Contents What is EzEditor2? EzEditor2 is a nucleotide and amino acid sequence editor that can be used along with EzBioCloud’s Identify and comparative genomics service.

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[EzEditor2] Installation

Installation of EzEditor2 and related programs EzEditor2 is a JAVA program and requires other external programs to run together. Install the followings before running EzEditor2 program.

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