Everything You Need For Microbial Bioinformatics
Learn how to perform bioinformatics, taxonomy, typing and microbiome analysis on bacterial genomics. Also, learn the scientific background of some of the most widely used tools.
Welcome! The purpose of this tutorial is to get familiar with EzBioCloud’s many functions, and to be able to apply that knowledge to a scenario
Microbiome taxonomic profiling (MTP) is a method to elucidate taxonomic composition of the complex microbial community. The currently available and widely used NGS platforms are
Taxonomic profile of human microbiome at EzBioCloud.net EzBioCloud 16S database provides a comprehensive taxonomic backbone of Bacteria. Here we applied the sophisticated bioinformatics pipeline for
Discover Biomarkers Facilitating Anti-PD-L1 Efficacy The gut microbiota plays an important role in shaping systemic immune responses. In a study published in the journal Science,
Misidentified or incompletely identified bacterial genome sequences appear frequently in public reference databases. These databases can be significantly improved by genome-based identification against an up-to-date, systematically curated
The below are the example files for you to test drive Microbiome Taxonomic Profile (MTP) pipeline of the EzBioCloud cloud. Illumina MiSeq paired-end data of a
EzBioCloud Microbiome Taxonomic Profile data can be exported as a plain text file for you to use with other software tools such as the R package.
The genome sequence that is labeled as “Lachnospiraceae bacterium 5_1_63FAA” has been included in most microbiome taxonomic profiling software tools, and has therefore appeared in
Species-level microbiome analysis using EzBioCloud EzBioCloud 16S database is designed to be best performed for species-level identification even though there is a limitation due to
Human Microbiome Project funded by US National Institutes of Health (NIH) resulted in the taxonomic profiling data of microbiomes on 19 body sites of 242