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Microbial Bioinformatics 을 위해 필요한 모든 것

 이 사이트에서는, 미생물 지놈 분석을 위한  bioinformatics, 미생물 분류 (taxonomy), typing 과 마이크로바이옴 분석 과정을 배울 수 있습니다.  또한, 널리 사용되고 있는 관련된  프로그램들의 과학적인 배경과 원칙등 을 배울 수 있습니다. 

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Microbiome | MetagenomicsIsolate GenomicsIsolate IdentificationTrueBacEzBioCloud

Genomes in this data set

This table contains the following information (only selected columns are explained): Title of column Description  Download CLG CLG is a data file with a special

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Pan-genome analysis

A pan-genome is a union of the protein-coding genes (=CDS) in a given set of genomes. Generally, building a pan-genome starts from a set of annotated

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[UBCG] example commands

Run these lines to generate bcg files from fasta files. java -jar UBCG.jar extract -bcg_dir bcg -i fasta/CP012646_s_GCA_001281025.1_KCOM_1350.fasta -label “CP012646_s KCOM 1350” -acc “GCA_001281025.1” -taxon

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Ortholog and its detection

Definition of Homology, Orthology and Paralogy Homology is a term used when two genes share a common ancestor. The two genes are considered “homologous” or “not homologous” depending

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[UBCG] Gene set

This document describes the gene set included the current version of UBCG phylogenomics pipeline [Learn more]. Gene COG category COG ID HMM profile Function alaS

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